FB2024_01 , released February 22, 2024
FB2024_01 , released February 22, 2024
CV Term Report
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General Information
Term nucleus ID (Ontology) GO:0005634 (Gene Ontology)
Definition A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
Also Known As "cell nucleus"
Comment
Links to Extrernal Ontologies
  QuickGO data     AmiGO data
Annotations
Records annotated with this term OR any of its CHILD TERMS
Records annotated with this exact term (annotations to child terms are NOT included)
Data Class Field Records
Alleles (FBal)  PHENOTYPE_MANIFEST_IN     126
Genes (FBgn)  GO_CELLULAR_COMPONENT    2272
Insertions (FBti)  EXPRESSION_STAGE_TISSUE_POSITION      23
Constructs (FBtp)  PHENOTYPE_MANIFEST_IN      56
show Full annotation statements including this term (annotations to child terms are NOT included), and relevant FlyBase records
 Full annotation statements 
Relevant FlyBase reports
 Alleles Gene Groups Genes Insertions Constructs
 nucleus (all annotations which use CV term, excluding "NOT" statements)     126     96   2302     23     75
     colocalizes_with | nucleus       --       --       6       --       --
     is_active_in | nucleus       --       --    1359       --       --
     located_in | nucleus       --       --    1531       --       --
     nucleus | adult stage      63       --       --       --      51
     nucleus | adult stage | cell autonomous       3       --       --       --       3
     nucleus | adult stage | cell non-autonomous       2       --       --       --       2
     nucleus | adult stage | conditional       2       --       --       --       1
     nucleus | adult stage | decreased number       2       --       --       --       1
     nucleus | adult stage | female       7       --       --       --       5
     nucleus | adult stage | male       5       --       --       --       2
     nucleus | adult stage | somatic clone       2       --       --       --       --
     nucleus | blastoderm stage       4       --       --       --       2
     nucleus | blastoderm stage | germline clone       1       --       --       --       --
     nucleus | blastoderm stage | maternal effect       2       --       --       --       --
     nucleus | blastoderm stage | non-rescuable maternal effect       1       --       --       --       --
     nucleus | cell autonomous | larval stage | somatic clone       9       --       --       --       9
     nucleus | cell autonomous | somatic clone       1       --       --       --       --
     nucleus | conditional | embryonic stage 4       1       --       --       --       --
     nucleus | decreased number | embryonic stage       1       --       --       --       --
     nucleus | decreased number | embryonic stage 16       3       --       --       --       3
     nucleus | decreased number | embryonic stage | paternal effect       1       --       --       --       --
     nucleus | decreased number | germline clone | oogenesis       1       --       --       --       --
     nucleus | decreased number | larval stage       2       --       --       --       2
     nucleus | decreased number | oogenesis       3       --       --       --       4
     nucleus | ectopic | embryonic stage 4 | maternal effect       1       --       --       --       --
     nucleus | ectopic | female       5       --       --       --       6
     nucleus | ectopic | heat sensitive       1       --       --       --       --
     nucleus | embryonic cycle 11       1       --       --       --       --
     nucleus | embryonic cycle 12       1       --       --       --       --
     nucleus | embryonic cycle 12 | germline clone | maternal effect       1       --       --       --       --
     nucleus | embryonic cycle 13       1       --       --       --       --
     nucleus | embryonic cycle 13 | germline clone | maternal effect       1       --       --       --       --
     nucleus | embryonic cycle 14 | germline clone | maternal effect       2       --       --       --       --
     nucleus | embryonic cycle 6 | maternal effect       2       --       --       --       --
     nucleus | embryonic stage      41       --       --       --      10
     nucleus | embryonic stage 16       6       --       --       --       3
     nucleus | embryonic stage 16 | increased number       1       --       --       --       --
     nucleus | embryonic stage 4      17       --       --       --       4
     nucleus | embryonic stage 4 | germline clone       8       --       --       --       --
     nucleus | embryonic stage 4 | germline clone | maternal effect       1       --       --       --       --
     nucleus | embryonic stage 4 | germline clone | non-rescuable maternal effect       2       --       --       --       --
     nucleus | embryonic stage 4 | maternal effect       7       --       --       --       --
     nucleus | embryonic stage 5       5       --       --       --       5
     nucleus | embryonic stage 5 | germline clone | maternal effect       1       --       --       --       --
     nucleus | embryonic stage 5 | maternal effect       3       --       --       --       3
     nucleus | embryonic stage 9       2       --       --       --       2
     nucleus | embryonic stage | germline clone       8       --       --       --       --
     nucleus | embryonic stage | increased number       5       --       --       --       4
     nucleus | embryonic stage | maternal effect      21       --       --       --       6
     nucleus | embryonic stage | maternal effect | heat sensitive       1       --       --       --       --
     nucleus | embryonic stage | parental effect       2       --       --       --       --
     nucleus | extended germ band stage       1       --       --       --       --
     nucleus | female       4       --       --       --       2
     nucleus | first instar larval stage       2       --       --       --       1
     nucleus | gastrula stage       1       --       --       --       --
     nucleus | germline clone       9       --       --       --       --
     nucleus | germline clone | increased number       1       --       --       --       --
     nucleus | germline clone | maternal effect | pre-blastoderm stage       1       --       --       --       --
     nucleus | germline clone | oogenesis stage S14       1       --       --       --       --
     nucleus | increased number      14       --       --       --      11
     nucleus | increased number | male       4       --       --       --       2
     nucleus | increased number | oogenesis       2       --       --       --       3
     nucleus | increased number | third instar larval stage      10       --       --       --       8
     nucleus | larval stage      78       --       --       --      49
     nucleus | larval stage | nutrition conditional       4       --       --       --       4
     nucleus | larval stage | somatic clone       4       --       --       --       1
     nucleus | male       7       --       --       --       2
     nucleus | maternal effect       3       --       --       --       --
     nucleus | oogenesis stage S14       1       --       --       --       --
     nucleus | oogenesis stage S7       1       --       --       --       --
     nucleus | oogenesis stage S8       1       --       --       --       --
     nucleus | oogenesis | oogenesis       7       --       --       --       5
     nucleus | oogenesis | somatic clone       1       --       --       --       --
     nucleus | P-stage       1       --       --       --       --
     nucleus | pharate adult stage       2       --       --       --       1
     nucleus | pre-blastoderm stage       3       --       --       --       --
     nucleus | progressive       2       --       --       --       2
     nucleus | pupal stage       3       --       --       --       3
     nucleus | pupal stage | somatic clone       1       --       --       --       --
     nucleus | pupal stage | somatic clone | temperature conditional       1       --       --       --       --
     nucleus | somatic clone       9       --       --       --       8
     nucleus | somatic clone - Minute background | third instar larval stage       1       --       --       --       --
     nucleus | somatic clone | spermatogenesis       1       --       --       --       --
     nucleus | somatic clone | third instar larval stage       3       --       --       --       2
     nucleus | somatic clone | wandering third instar larval stage       2       --       --       --       --
     nucleus | spermatogenesis      29       --       --       --       6
     nucleus | spermatogenesis | third instar larval stage       1       --       --       --       --
     nucleus | third instar larval stage      76       --       --       --      38
 NOT | located_in | nucleus       --       --       1       --       --
Spanning Tree (Parents/Children)
Only view relationship:
membrane-bounded organelle__
intracellular organelle_____|
                            intracellular membrane-bounded organelle
                             |__nucleus  3735 rec.
                                 |__ascospore-type prospore nucleus
                                 |__dense nuclear body
                                 |__generative cell nucleus
                                 |__germ cell nucleus 62 rec.
                                 |   |__female germ cell nucleus(+) 26 rec.
                                 |   |__male germ cell nucleus(+) 35 rec.
                                 |   |__Rhino-Deadlock-Cutoff Complex 1 rec.
                                 |__left nucleus
                                 |__macronucleus
                                 |__megasporocyte nucleus
                                 |   |__antipodal cell nucleus
                                 |   |__megagametophyte egg cell nucleus
                                 |   |__polar nucleus
                                 |__micronucleus
                                 |__microsporocyte nucleus
                                 |__mitotic nuclear bridge
                                 |   |__mitotic nuclear bridge midzone(+)
                                 |   |__mitotic nuclear bridge stalk
                                 |__nuclear envelope 146 rec.
                                 |   |__microtubule organizing center attachment site(+) 3 rec.
                                 |   |__nuclear envelope adjacent to nuclear pore complex
                                 |   |__nuclear envelope lumen 2 rec.
                                 |   |__nuclear membrane(+) 48 rec.
                                 |   |__nuclear membrane protein complex(+) 5 rec.
                                 |   |__nuclear pore(+) 52 rec.
                                 |   |__nucleoplasmic reticulum
                                 |__nuclear inclusion body 1 rec.
                                 |   |__nucleolar peripheral inclusion body
                                 |__nuclear lumen 1072 rec.
                                 |   |__nuclear chromosome(+) 265 rec.
                                 |   |__nuclear exosome (RNase complex)(+) 11 rec.
                                 |   |__nuclear periphery(+) 40 rec.
                                 |   |__nuclear proteasome complex(+)
                                 |   |__nucleolus(+) 390 rec.
                                 |   |__nucleolus-like body
                                 |   |__nucleoplasm(+) 499 rec.
                                 |   |__perinucleolar compartment
                                 |__nuclear microtubule 1 rec.
                                 |__nuclear protein-containing complex 991 rec.
                                 |   |__5-lipoxygenase complex
                                 |   |__activated SUMO-E1 ligase complex
                                 |   |__apolipoprotein B mRNA editing enzyme complex
                                 |   |__ARC complex
                                 |   |__ASTRA complex
                                 |   |__ATR-ATRIP complex
                                 |   |__box H/ACA scaRNP complex
                                 |   |__box H/ACA snoRNP complex 5 rec.
                                 |   |__box H/ACA telomerase RNP complex
                                 |   |__BRCA1-A complex
                                 |   |__BRCA1-B complex
                                 |   |__BRCA1-C complex
                                 |   |__BRCA1-Rad51 complex
                                 |   |__BRCA2-BRAF35 complex
                                 |   |__BRISC complex
                                 |   |__CAK-ERCC2 complex
                                 |   |__carboxy-terminal domain protein kinase complex(+) 18 rec.
                                 |   |__catenin-TCF7L2 complex(+)
                                 |   |__CBF3 complex
                                 |   |__CENP-A recruiting complex
                                 |   |__CENP-T-W-S-X complex
                                 |   |__checkpoint clamp complex 3 rec.
                                 |   |__CHOP-ATF3 complex
                                 |   |__chromatin silencing complex(+) 6 rec.
                                 |   |__COMA complex
                                 |   |__COP9 signalosome 14 rec.
                                 |   |__Cry-Per complex
                                 |   |__Ctf18 RFC-like complex 3 rec.
                                 |   |__CURI complex 2 rec.
                                 |   |__DASH complex
                                 |   |__Dbf4-dependent protein kinase complex 3 rec.
                                 |   |__delta DNA polymerase complex 4 rec.
                                 |   |__DNA helicase A complex
                                 |   |__DNA ligase III-XRCC1 complex 1 rec.
                                 |   |__DNA ligase IV complex 2 rec.
                                 |   |__DNA polymerase III, clamp loader chi/psi subcomplex
                                 |   |__DNA polymerase III, clamp loader complex(+)
                                 |   |__DNA polymerase III, core complex(+)
                                 |   |__DNA polymerase III, proofreading complex
                                 |   |__DNA replication factor A complex 2 rec.
                                 |   |__DNA replication factor C core complex
                                 |   |__DNA replication preinitiation complex(+) 14 rec.
                                 |   |__DNA-dependent protein kinase complex
                                 |   |__DNA-dependent protein kinase-DNA ligase 4 complex 2 rec.
                                 |   |__dosage compensation complex(+) 8 rec.
                                 |   |__DUBm complex 4 rec.
                                 |   |__E.F.G complex
                                 |   |__epsilon DNA polymerase complex 5 rec.
                                 |   |__exon-exon junction complex(+) 7 rec.
                                 |   |__FANCM-MHF complex
                                 |   |__Fanconi anaemia nuclear complex 1 rec.
                                 |   |__FHL2-CREB complex
                                 |   |__FHL3-CREB complex
                                 |   |__GATA1-TAL1-TCF3-Lmo2 complex
                                 |   |__GATA2-TAL1-TCF3-Lmo2 complex
                                 |   |__histone deacetylase complex(+) 35 rec.
                                 |   |__histone H3-K14 acetyltransferase complex(+) 1 rec.
                                 |   |__histone methyltransferase complex(+) 49 rec.
                                 |   |__histone pre-mRNA 3'end processing complex 4 rec.
                                 |   |__integrator complex 14 rec.
                                 |   |__Ku70:Ku80 complex 3 rec.
                                 |   |__Lid2 complex
                                 |   |__LinE complex
                                 |   |__MAML2-RBP-Jkappa-ICN1 complex
                                 |   |__MAML2-RBP-Jkappa-ICN2 complex
                                 |   |__MAML2-RBP-Jkappa-ICN3 complex
                                 |   |__MAML2-RBP-Jkappa-ICN4 complex
                                 |   |__MAML3-RBP-Jkappa-ICN1 complex
                                 |   |__MAML3-RBP-Jkappa-ICN2 complex
                                 |   |__MAML3-RBP-Jkappa-ICN3 complex
                                 |   |__MAML3-RBP-Jkappa-ICN4 complex
                                 |   |__mediator complex 34 rec.
                                 |   |__Mei2 nuclear dot complex
                                 |   |__meiotic recombination initiation complex
                                 |   |__microprocessor complex 3 rec.
                                 |   |__mitotic checkpoint complex(+) 1 rec.
                                 |   |__mitotic checkpoint complex, CDC20-MAD2 subcomplex
                                 |   |__Mpp10 complex 3 rec.
                                 |   |__Mre11 complex 4 rec.
                                 |   |__mRNA cap methyltransferase complex
                                 |   |__mRNA cleavage factor complex(+) 18 rec.
                                 |   |__MTREC complex
                                 |   |__MutLalpha complex 3 rec.
                                 |   |__MutLbeta complex
                                 |   |__MutSalpha complex 3 rec.
                                 |   |__MutSbeta complex
                                 |   |__MutSgamma complex
                                 |   |__Myb complex 12 rec.
                                 |   |__NF-kappaB complex(+)
                                 |   |__Noc complex(+) 5 rec.
                                 |   |__nuclear aryl hydrocarbon receptor complex
                                 |   |__nuclear cyclin-dependent protein kinase holoenzyme complex(+) 10 rec.
                                 |   |__nuclear DNA replication factor C complex(+)
                                 |   |__nuclear DNA-directed RNA polymerase complex(+) 105 rec.
                                 |   |__nuclear exosome (RNase complex)(+) 11 rec.
                                 |   |__nuclear exosome targeting complex
                                 |   |__nuclear membrane complex Bqt3-Bqt4
                                 |   |__nuclear membrane protein complex(+) 5 rec.
                                 |   |__nuclear origin of replication recognition complex 7 rec.
                                 |   |__nuclear pore(+) 52 rec.
                                 |   |__nuclear pore central transport channel 8 rec.
                                 |   |__nuclear pore cytoplasmic filaments 4 rec.
                                 |   |__nuclear pore inner ring 4 rec.
                                 |   |__nuclear pore linkers
                                 |   |__nuclear pore nuclear basket 4 rec.
                                 |   |__nuclear pore outer ring 8 rec.
                                 |   |__nuclear pore transmembrane ring 2 rec.
                                 |   |__nuclear pre-replicative complex 2 rec.
                                 |   |__nuclear proteasome complex(+)
                                 |   |__nuclear proteasome core complex(+)
                                 |   |__nuclear proteasome core complex, alpha-subunit complex
                                 |   |__nuclear proteasome core complex, beta-subunit complex
                                 |   |__nuclear proteasome regulatory particle(+)
                                 |   |__nuclear proteasome regulatory particle, base subcomplex
                                 |   |__nuclear proteasome regulatory particle, lid subcomplex
                                 |   |__nuclear replisome(+) 11 rec.
                                 |   |__nuclear RNA export factor complex
                                 |   |__nuclear RNA-directed RNA polymerase complex 1 rec.
                                 |   |__nuclear telomere cap complex(+)
                                 |   |__nuclear ubiquitin ligase complex(+) 32 rec.
                                 |   |__nucleolar preribosome
                                 |   |__nucleolar ribonuclease P complex 7 rec.
                                 |   |__nucleosome disassembly/reassembly complex
                                 |   |__nucleotide-excision repair complex(+) 5 rec.
                                 |   |__P-TEFb-cap methyltransferase complex
                                 |   |__PcG protein complex(+) 35 rec.
                                 |   |__PCNA complex 2 rec.
                                 |   |__PCNA-p21 complex
                                 |   |__PDX1-PBX1b-MRG1 complex
                                 |   |__PeBoW complex 3 rec.
                                 |   |__Pwp2p-containing subcomplex of 90S preribosome 5 rec.
                                 |   |__Rad51B-Rad51C complex
                                 |   |__Rad51B-Rad51C-Rad51D-XRCC2 complex 2 rec.
                                 |   |__Rad51C-XRCC3 complex 1 rec.
                                 |   |__RC-1 DNA recombination complex
                                 |   |__RCAF complex 49 rec.
                                 |   |__replication fork protection complex 3 rec.
                                 |   |__RES complex 1 rec.
                                 |   |__RGS6-DNMT1-DMAP1 complex
                                 |   |__Rhino-Deadlock-Cutoff Complex 1 rec.
                                 |   |__RITS complex
                                 |   |__RNA polymerase I transcription regulator complex(+) 3 rec.
                                 |   |__RNA polymerase I transcription repressor complex
                                 |   |__RNA polymerase II termination complex
                                 |   |__RNA polymerase II transcription regulator complex(+) 128 rec.
                                 |   |__RNA polymerase II transcription repressor complex(+) 9 rec.
                                 |   |__RNA polymerase III transcription repressor complex
                                 |   |__RNA polymerase IV transcription repressor complex
                                 |   |__RNA polymerase V transcription repressor complex
                                 |   |__Slx1-Slx4 complex 2 rec.
                                 |   |__small nuclear ribonucleoprotein complex(+) 106 rec.
                                 |   |__SMC loading complex(+) 2 rec.
                                 |   |__Smp focus
                                 |   |__SOSS complex 2 rec.
                                 |   |__spliceosomal complex(+) 194 rec.
                                 |   |__SUMO activating enzyme complex 2 rec.
                                 |   |__survivin complex
                                 |   |__SWI/SNF superfamily-type complex(+) 67 rec.
                                 |   |__Swi5-Sfr1 complex
                                 |   |__Swi5-Swi2 complex
                                 |   |__synapsis initiation complex
                                 |   |__t-UTP complex 3 rec.
                                 |   |__telomerase holoenzyme complex(+) 2 rec.
                                 |   |__THO complex(+) 7 rec.
                                 |   |__Tor2-Mei2-Ste11 complex
                                 |   |__TRAMP complex 3 rec.
                                 |   |__transcription elongation factor complex(+) 51 rec.
                                 |   |__transcription export complex(+) 10 rec.
                                 |   |__transcription export complex 2 4 rec.
                                 |   |__tRNA-intron endonuclease complex 4 rec.
                                 |   |__U2AF complex 5 rec.
                                 |   |__UTP-C complex 2 rec.
                                 |   |__XRCC2-RAD51D complex
                                 |__nuclear stress granule 1 rec.
                                 |__nucleus lagging edge
                                 |__nucleus leading edge
                                 |__primary endosperm nucleus
                                 |__pronucleus 33 rec.
                                 |   |__female pronucleus 17 rec.
                                 |   |__male pronucleus 18 rec.
                                 |__retrotransposon nucleocapsid
                                 |__right nucleus
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NIF_Subcellular:sao1702920020
Wikipedia:Cell_nucleus